Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMMRHyaluronan mediated motility receptor. (724 aa)    
Predicted Functional Partners:
DLGAP5
DLG associated protein 5.
   
 
 0.990
APP
Amyloid beta precursor protein.
    
 0.979
BACH1
BTB domain and CNC homolog 1.
    
 
 0.977
AURKA
Aurora kinase A.
   
 0.973
NUF2
NUF2 component of NDC80 kinetochore complex.
   
 0.969
FAM83D
Family with sequence similarity 83 member D.
   
 
 0.966
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.964
CDK1
Cyclin dependent kinase 1.
   
 0.957
CEP55
Centrosomal protein 55.
   
 
 0.956
KIF2C
Kinesin family member 2C.
   
 
 0.955
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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