STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN13Tetraspanin 13. (204 aa)    
Predicted Functional Partners:
SNX13
Sorting nexin 13.
    
 
 0.787
ANKMY2
Ankyrin repeat and MYND domain containing 2.
      
 0.658
MST1R
Macrophage stimulating 1 receptor.
    
 0.611
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.589
TSPAN17
Tetraspanin 17.
      
 0.588
ENSCWAP00000014210
annotation not available
      
 0.587
BZW2
Basic leucine zipper and W2 domains 2.
      
 0.568
BZW1
Basic leucine zipper and W2 domains 1.
      
 0.568
FRMD7
FERM domain containing 7.
      
 0.561
SLC30A5
Solute carrier family 30 member 5.
      
 0.558
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.