Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUDCD2NudC domain containing 2. (157 aa)    
Predicted Functional Partners:
RCBTB2
RCC1 and BTB domain containing protein 2.
    
  0.927
RCBTB1
RCC1 and BTB domain containing protein 1.
    
  0.927
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
    
 0.894
PRMT5
Protein arginine methyltransferase 5.
    
 
 0.816
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.779
TBC1D31
TBC1 domain family member 31.
    
 0.779
HERC1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
    
 0.741
SGO2
Shugoshin 2.
     
 0.726
RANBP2
RAN binding protein 2.
   
 
 0.705
TTBK1
Tau tubulin kinase 1.
    
 
 0.661
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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