Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CDC42BPACDC42 binding protein kinase alpha. (1781 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.926
LIMK2
LIM domain kinase 2.
    
 0.838
LIMK1
LIM domain kinase 1.
    
 0.815
PPP1R12C
Protein phosphatase 1 regulatory subunit 12C.
   
 0.815
NME8
NME/NM23 family member 8.
    
 
 0.814
RHOQ
Ras homolog family member Q.
    
 0.814
MYL12A
Myosin light chain 12A.
    
 0.791
MYL9
Myosin light chain 9.
    
 0.791
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
    
 0.787
CDC42EP4
CDC42 effector protein 4.
     
 0.784
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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