TMEM50B protein (Catagonus wagneri) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

TMEM50B

Transmembrane protein 50B. (158 aa)

Predicted Functional Partners:

LEPROT

0.979

LEPROTL1

0.979

MRPS6

0.682

TBATA

0.670

DOP1B

0.667

ENSCWAP00000013891

0.650

RILP

0.646

LYST

0.614

PAXBP1

0.613

DONSON

0.556

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DONSON	DOP1B	ENSCWAP00000003631	ENSCWAP00000010412	Downstream neighbor of SON.	DOP1 leucine zipper like protein B.	0.598
DONSON	MRPS6	ENSCWAP00000003631	ENSCWAP00000003840	Downstream neighbor of SON.	Mitochondrial ribosomal protein S6.	0.869
DONSON	TMEM50B	ENSCWAP00000003631	ENSCWAP00000003492	Downstream neighbor of SON.	Transmembrane protein 50B.	0.556
DOP1B	DONSON	ENSCWAP00000010412	ENSCWAP00000003631	DOP1 leucine zipper like protein B.	Downstream neighbor of SON.	0.598
DOP1B	ENSCWAP00000013891	ENSCWAP00000010412	ENSCWAP00000013891	DOP1 leucine zipper like protein B.	annotation not available	0.656
DOP1B	MRPS6	ENSCWAP00000010412	ENSCWAP00000003840	DOP1 leucine zipper like protein B.	Mitochondrial ribosomal protein S6.	0.690
DOP1B	PAXBP1	ENSCWAP00000010412	ENSCWAP00000003360	DOP1 leucine zipper like protein B.	PAX3 and PAX7 binding protein 1.	0.636
DOP1B	TBATA	ENSCWAP00000010412	ENSCWAP00000019684	DOP1 leucine zipper like protein B.	Thymus, brain and testes associated.	0.681
DOP1B	TMEM50B	ENSCWAP00000010412	ENSCWAP00000003492	DOP1 leucine zipper like protein B.	Transmembrane protein 50B.	0.667
ENSCWAP00000013891	DOP1B	ENSCWAP00000013891	ENSCWAP00000010412	annotation not available	DOP1 leucine zipper like protein B.	0.656
ENSCWAP00000013891	MRPS6	ENSCWAP00000013891	ENSCWAP00000003840	annotation not available	Mitochondrial ribosomal protein S6.	0.439
ENSCWAP00000013891	PAXBP1	ENSCWAP00000013891	ENSCWAP00000003360	annotation not available	PAX3 and PAX7 binding protein 1.	0.601
ENSCWAP00000013891	TBATA	ENSCWAP00000013891	ENSCWAP00000019684	annotation not available	Thymus, brain and testes associated.	0.659
ENSCWAP00000013891	TMEM50B	ENSCWAP00000013891	ENSCWAP00000003492	annotation not available	Transmembrane protein 50B.	0.650
LEPROT	TMEM50B	ENSCWAP00000012541	ENSCWAP00000003492	Leptin receptor overlapping transcript.	Transmembrane protein 50B.	0.979
LEPROTL1	TMEM50B	ENSCWAP00000019111	ENSCWAP00000003492	Leptin receptor overlapping transcript like 1.	Transmembrane protein 50B.	0.979
LYST	RILP	ENSCWAP00000024741	ENSCWAP00000002044	Lysosomal trafficking regulator.	Rab interacting lysosomal protein.	0.438
LYST	TMEM50B	ENSCWAP00000024741	ENSCWAP00000003492	Lysosomal trafficking regulator.	Transmembrane protein 50B.	0.614
MRPS6	DONSON	ENSCWAP00000003840	ENSCWAP00000003631	Mitochondrial ribosomal protein S6.	Downstream neighbor of SON.	0.869
MRPS6	DOP1B	ENSCWAP00000003840	ENSCWAP00000010412	Mitochondrial ribosomal protein S6.	DOP1 leucine zipper like protein B.	0.690