Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003493annotation not available (1686 aa)    
Predicted Functional Partners:
TRIM23
Tripartite motif containing 23.
    
 
 0.819
ENSCWAP00000014099
annotation not available
    
 
 0.742
CEP83
Centrosomal protein 83.
   
 0.734
SACS
Sacsin molecular chaperone.
    
 
 0.731
COPS2
COP9 signalosome subunit 2.
    
 0.684
IFT81
Intraflagellar transport 81.
    
 0.658
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.657
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.657
RELB
RELB proto-oncogene, NF-kB subunit.
   
 0.652
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.652
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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