Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC13Zinc finger CCHC-type containing 13. (171 aa)    
Predicted Functional Partners:
KRR1
KRR1 small subunit processome component homolog.
   
   0.884
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.821
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.821
MTREX
Mtr4 exosome RNA helicase.
   
 0.813
GAR1
GAR1 ribonucleoprotein.
   
   0.807
ENSCWAP00000000532
annotation not available
   
   0.805
ENSCWAP00000024043
annotation not available
   
   0.805
BRIX1
Biogenesis of ribosomes BRX1.
   
   0.792
FBLL1
Fibrillarin like 1.
   
 
 0.776
FBL
Fibrillarin.
   
 
 0.776
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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