STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT6Synaptotagmin 6. (527 aa)    
Predicted Functional Partners:
SYT3
Synaptotagmin 3.
    
   0.948
SYT10
Synaptotagmin 10.
    
   0.948
MADD
MAP kinase activating death domain.
    
   0.929
PGLYRP3
Peptidoglycan recognition protein 3.
      
 0.775
STON2
Stonin 2.
    
 0.765
SYT9
Synaptotagmin 9.
   
  0.711
SNAP25
Synaptosome associated protein 25.
    
 0.677
DRD2
Dopamine receptor D2.
   
  
 0.673
RAB3A
RAB3A, member RAS oncogene family.
   
 0.668
SLC18A2
Solute carrier family 18 member A2.
     
 0.641
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.