STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003528annotation not available (196 aa)    
Predicted Functional Partners:
FAM110B
Family with sequence similarity 110 member B.
    
   0.736
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.618
TRAPPC11
Trafficking protein particle complex 11.
      
 0.617
NEPRO
Nucleolus and neural progenitor protein.
      
 0.610
RETSAT
Retinol saturase.
      
 0.609
TMEM145
Transmembrane protein 145.
      
 0.609
PRSS56
Serine protease 56.
      
 0.588
PWWP2B
PWWP domain containing 2B.
      
 0.584
UVSSA
UV stimulated scaffold protein A.
      
 0.584
TTC28
Tetratricopeptide repeat domain 28.
      
 0.583
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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