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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YME1L1YME1 like 1 ATPase. (715 aa)    
Predicted Functional Partners:
YJEFN3
YjeF N-terminal domain containing 3.
   
   0.963
TIMMDC1
Translocase of inner mitochondrial membrane domain containing 1.
    
   0.963
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
   0.928
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
  
  
 0.903
PHB2
Prohibitin 2.
   
 0.900
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
  
 
0.898
PHB
Prohibitin.
   
 0.898
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 
0.896
STOML2
Stomatin like 2.
   
 0.886
STOML1
Stomatin like 1.
  
 0.861
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.