STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCF4Transcription factor 4. (664 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.991
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.955
MYOD1
Myogenic differentiation 1.
    
 0.942
MYOG
Myogenin.
    
 0.934
JUP
Junction plakoglobin.
    
 0.922
TCF3
Transcription factor 3.
   
 0.917
MYF6
Myogenic factor 6.
    
 0.912
ASCL3
Achaete-scute family bHLH transcription factor 3.
    
 0.907
ASCL2
Achaete-scute family bHLH transcription factor 2.
   
 0.906
MYF5
Myogenic factor 5.
    
 0.904
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.