STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBR1Ubiquitin protein ligase E3 component n-recognin 1. (1753 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.996
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 0.930
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
 0.930
MARCHF6
Membrane associated ring-CH-type finger 6.
   
 
 0.893
UBE2U
Ubiquitin conjugating enzyme E2 U.
    
 0.880
ENSCWAP00000026989
annotation not available
   
   0.868
FAF2
Fas associated factor family member 2.
    
 
 0.861
ZNF593
Zinc finger protein 593.
    
   0.861
PHIP
Pleckstrin homology domain interacting protein.
   
 
 0.825
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
   
  
 0.818
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.