STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMIGD1Transmembrane and immunoglobulin domain containing 1. (262 aa)    
Predicted Functional Partners:
GUCA2A
Guanylate cyclase activator 2A.
   
  
 0.948
CLRN3
Clarin 3.
   
  
 0.629
GUCA2B
Guanylate cyclase activator 2B.
   
  
 0.624
OTOP3
Otopetrin 3.
      
 0.619
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.599
ENSCWAP00000002777
annotation not available
      
 0.588
MTURN
Maturin, neural progenitor differentiation regulator homolog.
      
 0.547
TMEM86B
Transmembrane protein 86B.
      
 0.537
NKX1-1
NK1 homeobox 1.
      
 0.537
AMN
Amnion associated transmembrane protein.
   
  
 0.528
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.