STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003579annotation not available (2285 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3b subunit 1.
   
   0.928
RBM39
RNA binding motif protein 39.
   
   0.919
ENSCWAP00000027154
annotation not available
   
   0.919
RBM23
RNA binding motif protein 23.
   
   0.919
PRRC2C
Proline rich coiled-coil 2C.
   
    0.915
ANKRD12
Ankyrin repeat domain 12.
   
   0.909
ENSCWAP00000015078
annotation not available
 
      0.899
DDX5
DEAD-box helicase 5.
   
 
 0.884
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.877
RANBP2
RAN binding protein 2.
   
 0.871
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.