STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDX4Caudal type homeobox 4. (284 aa)    
Predicted Functional Partners:
CDX1
Caudal type homeobox 1.
   
   0.752
SPATA22
Spermatogenesis associated 22.
      
 0.677
CHIC1
Cysteine rich hydrophobic domain 1.
      
 0.644
TBX6
T-box transcription factor 6.
   
 
 0.621
FGF4
Fibroblast growth factor 4.
    
 
 0.599
KDSR
3-ketodihydrosphingosine reductase.
      
 0.595
BTBD16
BTB domain containing 16.
      
 0.588
FGF5
Fibroblast growth factor 5.
    
 
 0.586
PEX11G
Peroxisomal biogenesis factor 11 gamma.
      
 0.585
TRAPPC5
Trafficking protein particle complex 5.
      
 0.585
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.