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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX4Caudal type homeobox 4. (284 aa)    
Predicted Functional Partners:
CHIC1
Cysteine rich hydrophobic domain 1.
 
    
 0.712
TBX6
T-box transcription factor 6.
   
 
 0.643
FGFBP3
Fibroblast growth factor binding protein 3.
      
 0.629
NAP1L2
Nucleosome assembly protein 1 like 2.
      
 0.603
RLIM
Ring finger protein, LIM domain interacting.
      
 0.600
PRR16
Proline rich 16.
      
 0.550
LMO2
LIM domain only 2.
      
 0.523
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 
 0.522
SLC16A2
Solute carrier family 16 member 2.
      
 0.497
SLC16A10
Solute carrier family 16 member 10.
      
 0.497
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.