STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003587annotation not available (116 aa)    
Predicted Functional Partners:
ZC2HC1A
Zinc finger C2HC-type containing 1A.
      
 0.585
ENSCWAP00000006891
annotation not available
  
    0.536
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
   
    0.518
ENSCWAP00000016558
annotation not available
   
    0.504
ENSCWAP00000017623
annotation not available
   
    0.504
CTC1
CST telomere replication complex component 1.
  
   
 0.486
SPEM1
Spermatid maturation 1.
  
     0.482
TMEM160
Transmembrane protein 160.
   
  
 0.477
NFU1
NFU1 iron-sulfur cluster scaffold.
      
 0.469
ERICH4
Glutamate rich 4.
  
     0.449
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.