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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOSTDC1Sclerostin domain containing 1. (229 aa)    
Predicted Functional Partners:
RPA2
Replication protein A2.
      
 0.688
PDCD11
Programmed cell death 11.
      
 0.678
SH3BP5
SH3 domain binding protein 5.
      
 0.678
ENSCWAP00000010545
annotation not available
      
 0.667
PRCP
Prolylcarboxypeptidase.
      
 0.650
CBX1
Chromobox 1.
      
 0.629
ATP2B4
ATPase plasma membrane Ca2+ transporting 4.
      
 0.613
ENSCWAP00000000155
annotation not available
      
 0.504
MMP1
Matrix metallopeptidase 1.
      
 0.504
BMP1
Bone morphogenetic protein 1.
      
 0.501
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.