Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOSTDC1Sclerostin domain containing 1. (229 aa)    
Predicted Functional Partners:
SH3BP5
SH3 domain binding protein 5.
      
 0.583
ENSCWAP00000010545
annotation not available
      
 0.577
RPA2
Replication protein A2.
      
 0.576
LRP4
LDL receptor related protein 4.
      
 0.571
PRCP
Prolylcarboxypeptidase.
      
 0.535
PDCD11
Programmed cell death 11.
      
 0.529
ATP2B4
ATPase plasma membrane Ca2+ transporting 4.
      
 0.485
CBX1
Chromobox 1.
      
 0.419
MATN4
Matrilin 4.
      
 0.415
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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