Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BLMHBleomycin hydrolase. (455 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
    
 
 0.956
KERA
Keratocan.
    
   0.948
APP
Amyloid beta precursor protein.
    
 
 0.814
NUDT13
Nudix hydrolase 13.
    
 
 0.793
AACS
acetoacetyl-CoA synthetase.
   
   0.781
CLIC4
Chloride intracellular channel 4.
    
   0.776
ZNHIT3
Zinc finger HIT-type containing 3.
    
   0.737
CASP14
Caspase 14.
    
 
 0.692
ENSCWAP00000008158
annotation not available
    
 
 0.684
SPATA4
Spermatogenesis associated 4.
      
 0.674
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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