Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DBX2Developing brain homeobox 2. (337 aa)    
Predicted Functional Partners:
LHX5
LIM homeobox 5.
    
 
 0.641
OLIG3
Oligodendrocyte transcription factor 3.
   
  
 0.640
IRX3
Iroquois homeobox 3.
    
 
 0.625
PRDM13
PR/SET domain 13.
    
 
 0.569
MIDN
Midnolin.
      
 0.531
ENSCWAP00000004776
annotation not available
    
  0.525
RNF220
Ring finger protein 220.
    
 
 0.504
FOXA2
Forkhead box A2.
      
 0.502
ZC4H2
Zinc finger C4H2-type containing.
      
 0.497
TMEM67
Transmembrane protein 67.
     
  0.466
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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