ENSCWAP00000003619 protein (Catagonus wagneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCWAP00000003619

annotation not available (355 aa)

Predicted Functional Partners:

H2AZ2

0.728

H2AZ1

0.728

SDAD1

0.679

IPO9

0.629

SHISA4

0.629

ENSCWAP00000009354

0.558

ENSCWAP00000015627

0.558

ENSCWAP00000018955

0.558

ENSCWAP00000027906

0.558

ENSCWAP00000021731

0.527

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000003619	ENSCWAP00000009354	ENSCWAP00000003619	ENSCWAP00000009354	annotation not available	annotation not available	0.558
ENSCWAP00000003619	ENSCWAP00000015627	ENSCWAP00000003619	ENSCWAP00000015627	annotation not available	annotation not available	0.558
ENSCWAP00000003619	ENSCWAP00000018955	ENSCWAP00000003619	ENSCWAP00000018955	annotation not available	annotation not available	0.558
ENSCWAP00000003619	ENSCWAP00000021731	ENSCWAP00000003619	ENSCWAP00000021731	annotation not available	annotation not available	0.527
ENSCWAP00000003619	ENSCWAP00000027906	ENSCWAP00000003619	ENSCWAP00000027906	annotation not available	annotation not available	0.558
ENSCWAP00000003619	H2AZ1	ENSCWAP00000003619	ENSCWAP00000009889	annotation not available	H2A.Z variant histone 1.	0.728
ENSCWAP00000003619	H2AZ2	ENSCWAP00000003619	ENSCWAP00000002682	annotation not available	H2A.Z variant histone 2.	0.728
ENSCWAP00000003619	IPO9	ENSCWAP00000003619	ENSCWAP00000012367	annotation not available	Importin 9.	0.629
ENSCWAP00000003619	SDAD1	ENSCWAP00000003619	ENSCWAP00000023792	annotation not available	SDA1 domain containing 1.	0.679
ENSCWAP00000003619	SHISA4	ENSCWAP00000003619	ENSCWAP00000012441	annotation not available	Shisa family member 4.	0.629
ENSCWAP00000009354	ENSCWAP00000003619	ENSCWAP00000009354	ENSCWAP00000003619	annotation not available	annotation not available	0.558
ENSCWAP00000015627	ENSCWAP00000003619	ENSCWAP00000015627	ENSCWAP00000003619	annotation not available	annotation not available	0.558
ENSCWAP00000018955	ENSCWAP00000003619	ENSCWAP00000018955	ENSCWAP00000003619	annotation not available	annotation not available	0.558
ENSCWAP00000021731	ENSCWAP00000003619	ENSCWAP00000021731	ENSCWAP00000003619	annotation not available	annotation not available	0.527
ENSCWAP00000027906	ENSCWAP00000003619	ENSCWAP00000027906	ENSCWAP00000003619	annotation not available	annotation not available	0.558
H2AZ1	ENSCWAP00000003619	ENSCWAP00000009889	ENSCWAP00000003619	H2A.Z variant histone 1.	annotation not available	0.728
H2AZ1	IPO9	ENSCWAP00000009889	ENSCWAP00000012367	H2A.Z variant histone 1.	Importin 9.	0.675
H2AZ1	SHISA4	ENSCWAP00000009889	ENSCWAP00000012441	H2A.Z variant histone 1.	Shisa family member 4.	0.675
H2AZ2	ENSCWAP00000003619	ENSCWAP00000002682	ENSCWAP00000003619	H2A.Z variant histone 2.	annotation not available	0.728
H2AZ2	IPO9	ENSCWAP00000002682	ENSCWAP00000012367	H2A.Z variant histone 2.	Importin 9.	0.675