Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSRP1Nuclear speckle splicing regulatory protein 1. (554 aa)    
Predicted Functional Partners:
PPIL4
Peptidylprolyl isomerase like 4.
   
 0.995
MTREX
Mtr4 exosome RNA helicase.
     
 0.960
SRRM1
Serine and arginine repetitive matrix 1.
   
 
 0.955
PPIL1
Peptidylprolyl isomerase like 1.
    
  0.948
ENSCWAP00000013422
annotation not available
    
  0.948
DHX35
DEAH-box helicase 35.
   
 0.948
CTNNBL1
Catenin beta like 1.
    
   0.948
CWC25
CWC25 spliceosome associated protein homolog.
   
 
  0.947
PPIL2
Peptidylprolyl isomerase like 2.
    
  0.947
CWC22
CWC22 spliceosome associated protein homolog.
   
 
  0.944
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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