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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSRP1Nuclear speckle splicing regulatory protein 1. (554 aa)    
Predicted Functional Partners:
SRRM1
Serine and arginine repetitive matrix 1.
     
 0.978
SRRM2
Serine/arginine repetitive matrix 2.
   
 
 0.977
PPIL4
Peptidylprolyl isomerase like 4.
    
 0.971
CDC5L
Cell division cycle 5 like.
   
   0.964
PPIG
Peptidylprolyl isomerase G.
   
  0.961
YJU2
YJU2 splicing factor homolog.
   
 
  0.945
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
   
 
  0.943
DHX35
DEAH-box helicase 35.
   
 0.942
PPIL2
Peptidylprolyl isomerase like 2.
    
  0.941
PPIL1
Peptidylprolyl isomerase like 1.
    
  0.941
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.