STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPWD1Peptidylprolyl isomerase domain and WD repeat containing 1. (644 aa)    
Predicted Functional Partners:
PPIL1
Peptidylprolyl isomerase like 1.
    
 0.991
CWC22
CWC22 spliceosome associated protein homolog.
   
  0.989
CDC40
Cell division cycle 40.
   
 0.989
DHX38
DEAH-box helicase 38.
   
 0.988
CWC25
CWC25 spliceosome associated protein homolog.
    
 0.988
WDR70
WD repeat domain 70.
   
 0.988
CACTIN
Cactin, spliceosome C complex subunit.
    
  0.988
SLU7
SLU7 homolog, splicing factor.
    
 0.987
CCDC12
Coiled-coil domain containing 12.
    
 0.987
SYF2
SYF2 pre-mRNA splicing factor.
   
 0.983
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.