ENSCWAP00000003697 protein (Catagonus wagneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCWAP00000003697

annotation not available (105 aa)

Predicted Functional Partners:

TNN

0.730

TNR

0.730

TNC

0.730

ENSCWAP00000003688

0.589

DGKK

0.578

DGKD

0.578

DGKH

0.507

RIPK4

0.449

HCST

0.412

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGKD	DGKH	ENSCWAP00000028423	ENSCWAP00000000887	Diacylglycerol kinase delta.	Diacylglycerol kinase eta.	0.691
DGKD	ENSCWAP00000003688	ENSCWAP00000028423	ENSCWAP00000003688	Diacylglycerol kinase delta.	annotation not available	0.810
DGKD	ENSCWAP00000003697	ENSCWAP00000028423	ENSCWAP00000003697	Diacylglycerol kinase delta.	annotation not available	0.578
DGKH	DGKD	ENSCWAP00000000887	ENSCWAP00000028423	Diacylglycerol kinase eta.	Diacylglycerol kinase delta.	0.691
DGKH	DGKK	ENSCWAP00000000887	ENSCWAP00000009287	Diacylglycerol kinase eta.	Diacylglycerol kinase kappa.	0.691
DGKH	ENSCWAP00000003688	ENSCWAP00000000887	ENSCWAP00000003688	Diacylglycerol kinase eta.	annotation not available	0.810
DGKH	ENSCWAP00000003697	ENSCWAP00000000887	ENSCWAP00000003697	Diacylglycerol kinase eta.	annotation not available	0.507
DGKK	DGKH	ENSCWAP00000009287	ENSCWAP00000000887	Diacylglycerol kinase kappa.	Diacylglycerol kinase eta.	0.691
DGKK	ENSCWAP00000003688	ENSCWAP00000009287	ENSCWAP00000003688	Diacylglycerol kinase kappa.	annotation not available	0.810
DGKK	ENSCWAP00000003697	ENSCWAP00000009287	ENSCWAP00000003697	Diacylglycerol kinase kappa.	annotation not available	0.578
ENSCWAP00000003688	DGKD	ENSCWAP00000003688	ENSCWAP00000028423	annotation not available	Diacylglycerol kinase delta.	0.810
ENSCWAP00000003688	DGKH	ENSCWAP00000003688	ENSCWAP00000000887	annotation not available	Diacylglycerol kinase eta.	0.810
ENSCWAP00000003688	DGKK	ENSCWAP00000003688	ENSCWAP00000009287	annotation not available	Diacylglycerol kinase kappa.	0.810
ENSCWAP00000003688	ENSCWAP00000003697	ENSCWAP00000003688	ENSCWAP00000003697	annotation not available	annotation not available	0.589
ENSCWAP00000003697	DGKD	ENSCWAP00000003697	ENSCWAP00000028423	annotation not available	Diacylglycerol kinase delta.	0.578
ENSCWAP00000003697	DGKH	ENSCWAP00000003697	ENSCWAP00000000887	annotation not available	Diacylglycerol kinase eta.	0.507
ENSCWAP00000003697	DGKK	ENSCWAP00000003697	ENSCWAP00000009287	annotation not available	Diacylglycerol kinase kappa.	0.578
ENSCWAP00000003697	ENSCWAP00000003688	ENSCWAP00000003697	ENSCWAP00000003688	annotation not available	annotation not available	0.589
ENSCWAP00000003697	HCST	ENSCWAP00000003697	ENSCWAP00000004534	annotation not available	Hematopoietic cell signal transducer.	0.412
ENSCWAP00000003697	RIPK4	ENSCWAP00000003697	ENSCWAP00000015876	annotation not available	Receptor interacting serine/threonine kinase 4.	0.449