STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM168AFamily with sequence similarity 168 member A. (244 aa)    
Predicted Functional Partners:
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
    
   0.948
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
   0.845
UBASH3B
Ubiquitin associated and SH3 domain containing B.
    
   0.803
POLR2C
RNA polymerase II subunit C.
    
   0.777
POLR2G
RNA polymerase II subunit G.
    
   0.770
RC3H1
Ring finger and CCCH-type domains 1.
    
   0.770
POLR2B
RNA polymerase II subunit B.
    
   0.765
POLR2D
RNA polymerase II subunit D.
    
   0.765
ITCH
Itchy E3 ubiquitin protein ligase.
    
   0.745
POLR2I
RNA polymerase II subunit I.
    
   0.726
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.