DLG4 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DLG4

Discs large MAGUK scaffold protein 4. (767 aa)

Predicted Functional Partners:

GRIN2B

0.999

DLG3

0.998

GRIN2A

0.998

GRIN2C

0.997

DLGAP1

0.997

GRIN2D

0.996

ENSCWAP00000021365

0.996

MDM2

0.995

GRIA1

0.994

ENSCWAP00000021416

0.994

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLG3	DLG4	ENSCWAP00000000517	ENSCWAP00000003704	Discs large MAGUK scaffold protein 3.	Discs large MAGUK scaffold protein 4.	0.998
DLG3	DLGAP1	ENSCWAP00000000517	ENSCWAP00000013830	Discs large MAGUK scaffold protein 3.	DLG associated protein 1.	0.946
DLG3	ENSCWAP00000021365	ENSCWAP00000000517	ENSCWAP00000021365	Discs large MAGUK scaffold protein 3.	annotation not available	0.938
DLG3	ENSCWAP00000021416	ENSCWAP00000000517	ENSCWAP00000021416	Discs large MAGUK scaffold protein 3.	annotation not available	0.938
DLG3	GRIA1	ENSCWAP00000000517	ENSCWAP00000001115	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor AMPA type subunit 1.	0.957
DLG3	GRIN2A	ENSCWAP00000000517	ENSCWAP00000025153	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor NMDA type subunit 2A.	0.995
DLG3	GRIN2B	ENSCWAP00000000517	ENSCWAP00000017354	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor NMDA type subunit 2B.	0.996
DLG3	GRIN2C	ENSCWAP00000000517	ENSCWAP00000011622	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor NMDA type subunit 2C.	0.920
DLG3	GRIN2D	ENSCWAP00000000517	ENSCWAP00000020193	Discs large MAGUK scaffold protein 3.	Glutamate ionotropic receptor NMDA type subunit 2D.	0.894
DLG3	MDM2	ENSCWAP00000000517	ENSCWAP00000023875	Discs large MAGUK scaffold protein 3.	MDM2 proto-oncogene.	0.842
DLG4	DLG3	ENSCWAP00000003704	ENSCWAP00000000517	Discs large MAGUK scaffold protein 4.	Discs large MAGUK scaffold protein 3.	0.998
DLG4	DLGAP1	ENSCWAP00000003704	ENSCWAP00000013830	Discs large MAGUK scaffold protein 4.	DLG associated protein 1.	0.997
DLG4	ENSCWAP00000021365	ENSCWAP00000003704	ENSCWAP00000021365	Discs large MAGUK scaffold protein 4.	annotation not available	0.996
DLG4	ENSCWAP00000021416	ENSCWAP00000003704	ENSCWAP00000021416	Discs large MAGUK scaffold protein 4.	annotation not available	0.994
DLG4	GRIA1	ENSCWAP00000003704	ENSCWAP00000001115	Discs large MAGUK scaffold protein 4.	Glutamate ionotropic receptor AMPA type subunit 1.	0.994
DLG4	GRIN2A	ENSCWAP00000003704	ENSCWAP00000025153	Discs large MAGUK scaffold protein 4.	Glutamate ionotropic receptor NMDA type subunit 2A.	0.998
DLG4	GRIN2B	ENSCWAP00000003704	ENSCWAP00000017354	Discs large MAGUK scaffold protein 4.	Glutamate ionotropic receptor NMDA type subunit 2B.	0.999
DLG4	GRIN2C	ENSCWAP00000003704	ENSCWAP00000011622	Discs large MAGUK scaffold protein 4.	Glutamate ionotropic receptor NMDA type subunit 2C.	0.997
DLG4	GRIN2D	ENSCWAP00000003704	ENSCWAP00000020193	Discs large MAGUK scaffold protein 4.	Glutamate ionotropic receptor NMDA type subunit 2D.	0.996
DLG4	MDM2	ENSCWAP00000003704	ENSCWAP00000023875	Discs large MAGUK scaffold protein 4.	MDM2 proto-oncogene.	0.995