STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB27BRAB27B, member RAS oncogene family. (218 aa)    
Predicted Functional Partners:
ENSCWAP00000007023
annotation not available
    
 0.980
SYTL4
Synaptotagmin like 4.
    
 0.967
SYTL1
Synaptotagmin like 1.
   
 0.965
SYTL5
Synaptotagmin like 5.
    
 0.960
SYTL3
Synaptotagmin like 3.
    
 0.950
ENSCWAP00000016835
annotation not available
    
 0.929
CD63
CD63 molecule.
     
 0.904
UNC13D
Unc-13 homolog D.
    
 
 0.895
RAB3D
RAB3D, member RAS oncogene family.
     
  0.839
RAB8B
RAB8B, member RAS oncogene family.
     
 0.821
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.