STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACBD5acyl-CoA binding domain containing 5. (534 aa)    
Predicted Functional Partners:
EFCC1
EF-hand and coiled-coil domain containing 1.
   
    0.867
PEX16
Peroxisomal biogenesis factor 16.
   
 0.844
PEX5
Peroxisomal biogenesis factor 5.
    
 0.819
VAPA
VAMP associated protein A.
    
 
 0.786
PXMP2
Peroxisomal membrane protein 2.
     
 0.761
DNAJC16
DnaJ heat shock protein family (Hsp40) member C16.
      
 0.759
ACAA1
acetyl-CoA acyltransferase 1.
   
 
 0.759
CREBRF
CREB3 regulatory factor.
     
 0.757
PEX14
Peroxisomal biogenesis factor 14.
   
 0.753
PJA2
Praja ring finger ubiquitin ligase 2.
      
 0.752
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.