Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IGF2RInsulin like growth factor 2 receptor. (2490 aa)    
Predicted Functional Partners:
IGF2
Insulin like growth factor 2.
    
 
 0.989
M6PR
Mannose-6-phosphate receptor, cation dependent.
     
 0.981
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.977
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.975
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 
 0.969
PLIN3
Perilipin 3.
   
 0.962
VPS26A
VPS26, retromer complex component A.
    
 
 0.958
GAK
Cyclin G associated kinase.
   
 
 0.921
SNX8
Sorting nexin 8.
    
 0.913
PLIN1
Perilipin 1.
   
 0.898
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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