Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHKBP1SH3KBP1 binding protein 1. (704 aa)    
Predicted Functional Partners:
KCTD3
Potassium channel tetramerization domain containing 3.
    
  0.952
CUL3
Cullin 3.
    
 
 0.948
TNFAIP3
TNF alpha induced protein 3.
    
   0.941
SH3KBP1
SH3 domain containing kinase binding protein 1.
    
 
 0.932
SNX27
Sorting nexin 27.
    
   0.890
GLTP
Glycolipid transfer protein.
    
   0.846
KCTD7
Potassium channel tetramerization domain containing 7.
    
 
 0.841
PIH1D1
PIH1 domain containing 1.
    
   0.834
LRRC40
Leucine rich repeat containing 40.
    
   0.830
CARM1
Coactivator associated arginine methyltransferase 1.
    
   0.821
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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