Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KPRPKeratinocyte proline rich protein. (566 aa)    
Predicted Functional Partners:
SERPINB12
Serpin family B member 12.
   
 0.921
DSG1
Desmoglein 1.
   
 
 0.917
C1orf68
Chromosome 1 open reading frame 68.
   
 
 0.892
CYSRT1
Cysteine rich tail 1.
   
 
 0.873
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.827
TCHHL1
Trichohyalin like 1.
    
 
 0.821
KRTAP7-1
Keratin associated protein 7-1 (gene/pseudogene).
      
 0.815
POLR2B
RNA polymerase II subunit B.
   
 0.809
POLR2F
RNA polymerase II subunit F.
    
 0.798
POLR2E
RNA polymerase II subunit E.
    
 0.797
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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