STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003752annotation not available (188 aa)    
Predicted Functional Partners:
SCN5A
Sodium voltage-gated channel alpha subunit 5.
    
 
 0.731
SCN8A
Sodium voltage-gated channel alpha subunit 8.
    
 
 0.691
RPL3
Ribosomal protein L3.
   
   0.652
FGFBP3
Fibroblast growth factor binding protein 3.
     
 0.607
FGFR4
Fibroblast growth factor receptor 4.
    
 0.602
SDC1
Syndecan 1.
    
 0.600
ENSCWAP00000027821
annotation not available
    
 0.600
ENSCWAP00000027831
annotation not available
    
 0.600
MET
MET proto-oncogene, receptor tyrosine kinase.
     
 0.594
MST1R
Macrophage stimulating 1 receptor.
     
 0.593
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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