STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NELL2Neural EGFL like 2. (866 aa)    
Predicted Functional Partners:
C4orf48
Chromosome 4 open reading frame 48.
   
 
 0.833
ROBO3
Roundabout guidance receptor 3.
    
 0.761
DBR1
Debranching RNA lariats 1.
    
 
 0.758
VPS13A
Vacuolar protein sorting 13 homolog A.
    
   0.754
LTBP3
Latent transforming growth factor beta binding protein 3.
    
   0.721
TGFB1
Transforming growth factor beta 1.
    
 0.641
NCSTN
Nicastrin.
    
 0.625
ADAM10
ADAM metallopeptidase domain 10.
    
 0.617
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.602
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.599
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.