Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003771annotation not available (450 aa)    
Predicted Functional Partners:
NUDCD1
NudC domain containing 1.
    
 
 0.782
MED15
Mediator complex subunit 15.
    
 
 0.769
ICOS
Inducible T cell costimulator.
   
 0.711
ENSCWAP00000015237
annotation not available
   
  
 0.709
SQSTM1
Sequestosome 1.
    
 0.679
DDX58
DExD/H-box helicase 58.
    
 0.661
TRIM44
Tripartite motif containing 44.
    
 
 0.648
VEPH1
Ventricular zone expressed PH domain containing 1.
   
    0.645
VSTM2L
V-set and transmembrane domain containing 2 like.
      
 0.598
UBB
Ubiquitin B.
    
  0.593
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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