STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPB42Erythrocyte membrane protein band 4.2. (688 aa)    
Predicted Functional Partners:
SLC4A1
Solute carrier family 4 member 1 (Diego blood group).
   
 0.999
RHAG
Rh associated glycoprotein.
   
 0.984
AHSP
Alpha hemoglobin stabilizing protein.
   
  
 0.983
TGM5
Transglutaminase 5.
    
 0.943
SPTA1
Spectrin alpha, erythrocytic 1.
   
 
 0.939
TMOD1
Tropomodulin 1.
   
  
 0.902
ENSCWAP00000007636
annotation not available
   
 
 0.889
DMTN
Dematin actin binding protein.
   
  
 0.875
F13B
Coagulation factor XIII B chain.
    
 0.872
ENSCWAP00000009174
annotation not available
    
  0.861
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.