STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003791annotation not available (171 aa)    
Predicted Functional Partners:
ACTR8
Actin related protein 8.
    
 0.751
ACTR5
Actin related protein 5.
    
 0.747
INO80C
INO80 complex subunit C.
    
 0.736
RUVBL1
RuvB like AAA ATPase 1.
    
 0.735
POLR1E
RNA polymerase I subunit E.
    
 0.722
ACTL6A
Actin like 6A.
   
 0.685
ACTL6B
Actin like 6B.
   
 0.685
GTF2H1
General transcription factor IIH subunit 1.
    
 0.669
GTF2H3
General transcription factor IIH subunit 3.
    
  0.655
ARID4A
AT-rich interaction domain 4A.
    
  0.649
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.