STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SREK1IP1SREK1 interacting protein 1. (155 aa)    
Predicted Functional Partners:
NUP153
Nucleoporin 153.
    
   0.838
NKAPD1
NKAP domain containing 1.
    
   0.797
PLEKHF2
Pleckstrin homology and FYVE domain containing 2.
    
   0.770
ZNF572
Zinc finger protein 572.
      
 0.644
CREG2
Cellular repressor of E1A stimulated genes 2.
      
 0.636
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
  
 0.610
WIPF1
WAS/WASL interacting protein family member 1.
      
 0.587
SH3TC2
SH3 domain and tetratricopeptide repeats 2.
      
 0.585
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
      
 0.580
ENSCWAP00000001696
annotation not available
      
 0.561
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.