STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL18Mitochondrial ribosomal protein L18. (179 aa)    
Predicted Functional Partners:
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
   
  0.987
MRPL40
Mitochondrial ribosomal protein L40.
   
   0.987
MRPL4
Mitochondrial ribosomal protein L4.
   
   0.983
MRPL44
Mitochondrial ribosomal protein L44.
   
 
 0.977
MRPL20
Mitochondrial ribosomal protein L20.
   
   0.972
MRPL13
Mitochondrial ribosomal protein L13.
   
   0.971
MRPL55
Mitochondrial ribosomal protein L55.
   
   0.968
MRPL52
Mitochondrial ribosomal protein L52.
   
   0.965
MRPL17
Mitochondrial ribosomal protein L17.
   
   0.964
MRPL32
Mitochondrial ribosomal protein L32.
   
   0.963
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.