STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHISAL2BShisa like 2B. (160 aa)    
Predicted Functional Partners:
SMAGP
Small cell adhesion glycoprotein.
      
 0.614
TMEM182
Transmembrane protein 182.
      
 0.538
LAPTM5
Lysosomal protein transmembrane 5.
      
 0.500
COL26A1
Collagen type XXVI alpha 1 chain.
      
 0.499
EMID1
EMI domain containing 1.
      
 0.499
EVC2
EvC ciliary complex subunit 2.
      
 0.466
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
      
 0.444
NAA20
N(alpha)-acetyltransferase 20, NatB catalytic subunit.
      
 0.415
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.