Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGM5Transglutaminase 5. (718 aa)    
Predicted Functional Partners:
TGM2
Transglutaminase 2.
    
  0.969
EPB42
Erythrocyte membrane protein band 4.2.
    
 0.943
F13B
Coagulation factor XIII B chain.
    
 0.872
CASP14
Caspase 14.
     
 0.797
CDSN
Corneodesmosin.
   
 
 0.762
PPL
Periplakin.
     
 0.757
CCL27
C-C motif chemokine ligand 27.
      
 0.754
DSG4
Desmoglein 4.
     
 0.741
F2
Coagulation factor II, thrombin.
    
 0.740
ENSCWAP00000027361
annotation not available
     
 0.692
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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