STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS18ADAM metallopeptidase with thrombospondin type 1 motif 18. (1225 aa)    
Predicted Functional Partners:
MORF4L2
Mortality factor 4 like 2.
    
 
 0.754
FAM83A
Family with sequence similarity 83 member A.
      
 0.749
GJA1
Gap junction protein alpha 1.
   
  
 0.653
CDKN1B
Cyclin dependent kinase inhibitor 1B.
      
 0.642
CCDC51
Coiled-coil domain containing 51.
      
 0.640
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
      
 0.638
REL
REL proto-oncogene, NF-kB subunit.
    
 
 0.630
PTN
Pleiotrophin.
      
 0.615
IHH
Indian hedgehog signaling molecule.
      
 0.605
ZNF541
Zinc finger protein 541.
      
 0.601
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.