Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PIM3Pim-3 proto-oncogene, serine/threonine kinase. (333 aa)    
Predicted Functional Partners:
PUF60
poly(U) binding splicing factor 60.
      
 0.754
BICC1
BicC family RNA binding protein 1.
      
 0.754
CENPJ
Centromere protein J.
    
 
 0.709
TRIM71
Tripartite motif containing 71.
    
 
 0.697
CDC25B
Cell division cycle 25B.
    
 0.674
COPS7B
COP9 signalosome subunit 7B.
      
 0.641
SCRIB
Scribble planar cell polarity protein.
    
 
 0.632
LRRC1
Leucine rich repeat containing 1.
    
 
 0.632
ENSCWAP00000018901
annotation not available
      
 0.628
ENSCWAP00000000134
annotation not available
      
 0.613
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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