Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGM7Transglutaminase 7. (710 aa)    
Predicted Functional Partners:
F13B
Coagulation factor XIII B chain.
    
 0.872
F2
Coagulation factor II, thrombin.
    
 0.740
LHFPL5
LHFPL tetraspan subfamily member 5.
   
  
 0.684
KCTD2
Potassium channel tetramerization domain containing 2.
    
  0.640
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.640
ENSCWAP00000020776
annotation not available
    
 0.635
ENSCWAP00000020828
annotation not available
    
 0.635
OXSR1
Oxidative stress responsive kinase 1.
      
 0.602
ARHGEF40
Rho guanine nucleotide exchange factor 40.
    
  0.593
ENSCWAP00000013828
annotation not available
    
  0.593
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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