Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CTDNEP1CTD nuclear envelope phosphatase 1. (244 aa)    
Predicted Functional Partners:
CNEP1R1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
   
 0.987
LPIN1
Lipin 1.
    
 0.956
LPIN2
Lipin 2.
    
 0.948
LPIN3
Lipin 3.
    
 0.948
GTF2F1
General transcription factor IIF subunit 1.
    
 0.771
P4HA1
Prolyl 4-hydroxylase subunit alpha 1.
    
 
 0.766
CDK13
Cyclin dependent kinase 13.
    
 0.761
KBTBD4
Kelch repeat and BTB domain containing 4.
      
 0.754
GTF2F2
General transcription factor IIF subunit 2.
    
 0.743
POLR2G
RNA polymerase II subunit G.
    
 0.722
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.