STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG16L2Autophagy related 16 like 2. (596 aa)    
Predicted Functional Partners:
ATG5
Autophagy related 5.
   
 0.996
ATG12
Autophagy related 12.
    
 0.995
ATG3
Autophagy related 3.
   
 0.994
RB1CC1
RB1 inducible coiled-coil 1.
   
 0.992
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.989
RAB33B
RAB33B, member RAS oncogene family.
    
 0.988
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 0.985
ATG10
Autophagy related 10.
    
 0.948
ATG16L1
Autophagy related 16 like 1.
  
 
 
0.946
RAB33A
RAB33A, member RAS oncogene family.
    
 0.942
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.