Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHD9Chromodomain helicase DNA binding protein 9. (2900 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.883
CHD8
Chromodomain helicase DNA binding protein 8.
   
    0.872
EPB41L5
Erythrocyte membrane protein band 4.1 like 5.
    
   0.812
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.807
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 
 0.788
ENSCWAP00000012604
annotation not available
   
    0.780
ENSCWAP00000012791
annotation not available
   
    0.780
ENSCWAP00000012860
annotation not available
   
    0.780
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.770
ZFP90
ZFP90 zinc finger protein.
    
 
 0.764
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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