STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase. (1246 aa)    
Predicted Functional Partners:
PLK1
Polo like kinase 1.
   
 0.995
EXO1
Exonuclease 1.
   
 0.970
CDC20
Cell division cycle 20.
   
  0.969
CDC20B
Cell division cycle 20B.
   
  0.968
CENPI
Centromere protein I.
   
 
 0.921
PCNA
Proliferating cell nuclear antigen.
  
 0.918
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.910
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.904
RUVBL2
RuvB like AAA ATPase 2.
   
 0.902
RUVBL1
RuvB like AAA ATPase 1.
    
 0.895
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.