Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004005annotation not available (703 aa)    
Predicted Functional Partners:
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
    
   0.948
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
    
   0.948
SHOC2
SHOC2 leucine rich repeat scaffold protein.
    
   0.866
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
    
   0.786
LRRD1
Leucine rich repeats and death domain containing 1.
    
   0.742
ENSCWAP00000019891
annotation not available
    
   0.739
GHITM
Growth hormone inducible transmembrane protein.
      
 0.734
CLRN3
Clarin 3.
      
 0.731
BORCS6
BLOC-1 related complex subunit 6.
      
 0.585
SNAP47
Synaptosome associated protein 47.
      
 0.576
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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