Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRN3Leucine rich repeat neuronal 3. (708 aa)    
Predicted Functional Partners:
NTNG1
Netrin G1.
    
 0.595
SH2D5
SH2 domain containing 5.
      
 0.583
SLC9A3R1
SLC9A3 regulator 1.
    
 
 0.580
SBDS
SBDS ribosome maturation factor.
      
 0.578
LIMA1
LIM domain and actin binding 1.
      
 0.570
TONSL
Tonsoku like, DNA repair protein.
    
  0.544
VPS26A
VPS26, retromer complex component A.
      
 0.536
CASK
Calcium/calmodulin dependent serine protein kinase.
    
  0.529
ENSCWAP00000004555
annotation not available
      
 0.524
ALG6
ALG6 alpha-1,3-glucosyltransferase.
      
 0.523
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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