STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZIBCXXC motif containing zinc binding protein. (160 aa)    
Predicted Functional Partners:
RCCD1
RCC1 domain containing 1.
      
 0.651
RFTN1
Raftlin, lipid raft linker 1.
      
 0.638
RBM8A
RNA binding motif protein 8A.
   
  0.634
ZC3H8
Zinc finger CCCH-type containing 8.
   
  
 0.600
LRRC42
Leucine rich repeat containing 42.
      
 0.598
ARHGEF16
Rho guanine nucleotide exchange factor 16.
      
 0.573
TMEM131
Transmembrane protein 131.
      
 0.562
PHYHD1
phytanoyl-CoA dioxygenase domain containing 1.
      
 0.557
ABCD1
ATP binding cassette subfamily D member 1.
      
 0.557
PBDC1
Polysaccharide biosynthesis domain containing 1.
      
 0.547
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.