Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004036annotation not available (222 aa)    
Predicted Functional Partners:
SOD1
Superoxide dismutase 1.
   
 0.993
SOD3
Superoxide dismutase 3.
   
 0.988
GPX8
Glutathione peroxidase 8 (putative).
   
 0.967
GPX7
Glutathione peroxidase 7.
   
 0.967
CAT
Catalase.
  
 0.962
PPARGC1A
PPARG coactivator 1 alpha.
    
 0.953
SIRT3
Sirtuin 3.
    
 0.952
CCS
Copper chaperone for superoxide dismutase.
  
 
 0.952
MRPL17
Mitochondrial ribosomal protein L17.
   
 0.947
GPX1
Glutathione peroxidase 1.
    
 0.942
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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